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Interpretation Extension: retrieve model from repository
anaRodrigues
Member Posts: 33 Contributor II
in Help
Hello,
I would like to generate a SHAP interpretation for a model I have stored in the repository. Is this possible? It doesn't seem to work.
Thanks in advance,
Ana
I would like to generate a SHAP interpretation for a model I have stored in the repository. Is this possible? It doesn't seem to work.
<?xml version="1.0" encoding="UTF-8"?><process version="9.9.000"> <context> <input/> <output/> <macros/> </context> <operator activated="true" class="process" compatibility="9.9.000" expanded="true" name="Process"> <parameter key="logverbosity" value="init"/> <parameter key="random_seed" value="2001"/> <parameter key="send_mail" value="never"/> <parameter key="notification_email" value=""/> <parameter key="process_duration_for_mail" value="30"/> <parameter key="encoding" value="SYSTEM"/> <process expanded="true"> <operator activated="true" class="retrieve" compatibility="9.9.000" expanded="true" height="68" name="Retrieve G_D_SVM-RFE_DT" width="90" x="246" y="34"> <parameter key="repository_entry" value="//Local Repository/Models_SVM-RFE/G_D_SVM-RFE_DT"/> </operator> <operator activated="true" class="retrieve" compatibility="9.9.000" expanded="true" height="68" name="Retrieve gland_trainSet_stable" width="90" x="112" y="136"> <parameter key="repository_entry" value="//Local Repository/gland_trainSet_stable"/> </operator> <operator activated="true" class="multiply" compatibility="9.9.000" expanded="true" height="103" name="Multiply" width="90" x="246" y="136"/> <operator activated="true" class="interpretation:generate_interpretation" compatibility="0.1.001" expanded="true" height="124" name="Generate Interpretation" width="90" x="447" y="85"> <parameter key="algorithm" value="Shapley"/> <parameter key="sample_size" value="100"/> <parameter key="redraw_local_samples" value="true"/> <parameter key="explanation_algorithm" value="Correlation"/> <parameter key="locality" value="0.2"/> <parameter key="use_local_random_seed" value="false"/> <parameter key="local_random_seed" value="1992"/> </operator> <connect from_op="Retrieve G_D_SVM-RFE_DT" from_port="output" to_op="Generate Interpretation" to_port="mod"/> <connect from_op="Retrieve gland_trainSet_stable" from_port="output" to_op="Multiply" to_port="input"/> <connect from_op="Multiply" from_port="output 1" to_op="Generate Interpretation" to_port="training"/> <connect from_op="Multiply" from_port="output 2" to_op="Generate Interpretation" to_port="test"/> <connect from_op="Generate Interpretation" from_port="importance" to_port="result 1"/> <connect from_op="Generate Interpretation" from_port="global weights" to_port="result 2"/> <portSpacing port="source_input 1" spacing="0"/> <portSpacing port="sink_result 1" spacing="0"/> <portSpacing port="sink_result 2" spacing="0"/> <portSpacing port="sink_result 3" spacing="0"/> </process> </operator> </process>
Thanks in advance,
Ana
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OptionsanaRodrigues Member Posts: 33 Contributor IIHi Martin,
All regular attributes are type 'real' as they should be. I think the problem is that the model was trained with an example set that went through feature selection, so the sets of attributes are not the same. I didn't think this would be an issue because the 'apply model' operator works just fine when I input the test set with the full set of attributes.
Do you know of any way to fix this?
Thanks,
Ana0
Answers
Dortmund, Germany
Here it is.
Thank you,
Ana
Dortmund, Germany
Dortmund, Germany